niftynet package

Subpackages

• niftynet.application package
  • Submodules
    • niftynet.application.autoencoder_application module
    • niftynet.application.base_application module
    • niftynet.application.gan_application module
    • niftynet.application.segmentation_application module
  • Module contents
• niftynet.contrib package
  • Subpackages
    • niftynet.contrib.ultrasound_simulator_gan package
      • Submodules
        • niftynet.contrib.ultrasound_simulator_gan.ultrasound_simulator_gan module
      • Module contents
  • Submodules
    • niftynet.contrib.rename_checkpoint_to_partial module
  • Module contents
• niftynet.engine package
  • Submodules
    • niftynet.engine.application_driver module
    • niftynet.engine.application_factory module
    • niftynet.engine.application_optimiser module
    • niftynet.engine.application_variables module
    • niftynet.engine.image_window module
    • niftynet.engine.image_window_buffer module
    • niftynet.engine.sampler_grid module
    • niftynet.engine.sampler_linear_interpolate module
    • niftynet.engine.sampler_random_vector module
    • niftynet.engine.sampler_resize module
    • niftynet.engine.sampler_uniform module
    • niftynet.engine.windows_aggregator_base module
    • niftynet.engine.windows_aggregator_grid module
    • niftynet.engine.windows_aggregator_identity module
    • niftynet.engine.windows_aggregator_resize module
  • Module contents
• niftynet.evaluation package
  • Submodules
    • niftynet.evaluation.pairwise_measures module
    • niftynet.evaluation.region_properties module
  • Module contents
• niftynet.io package
  • Submodules
    • niftynet.io.image_reader module
    • niftynet.io.image_type module
    • niftynet.io.misc_io module
    • niftynet.io.simple_itk_as_nibabel module
  • Module contents
• niftynet.layer package
  • Submodules
    • niftynet.layer.activation module
    • niftynet.layer.base_layer module
    • niftynet.layer.binary_masking module
    • niftynet.layer.bn module
    • niftynet.layer.channel_sparse_convolution module
    • niftynet.layer.convolution module
    • niftynet.layer.crf module
    • niftynet.layer.crop module
    • niftynet.layer.deconvolution module
    • niftynet.layer.dilatedcontext module
    • niftynet.layer.discrete_label_normalisation module
    • niftynet.layer.downsample module
    • niftynet.layer.elementwise module
    • niftynet.layer.fully_connected module
    • niftynet.layer.gan_blocks module
    • niftynet.layer.histogram_normalisation module
    • niftynet.layer.layer_util module
    • niftynet.layer.loss_autoencoder module
    • niftynet.layer.loss_gan module
    • niftynet.layer.loss_segmentation module
    • niftynet.layer.mean_variance_normalisation module
    • niftynet.layer.pad module
    • niftynet.layer.post_processing module
    • niftynet.layer.rand_flip module
    • niftynet.layer.rand_rotation module
    • niftynet.layer.rand_spatial_scaling module
    • niftynet.layer.reshape module
    • niftynet.layer.spatial_transformer module
    • niftynet.layer.upsample module
  • Module contents
• niftynet.network package
  • Submodules
    • niftynet.network.base_net module
    • niftynet.network.deepmedic module
    • niftynet.network.dense_vnet module
    • niftynet.network.highres3dnet module
    • niftynet.network.highres3dnet_large module
    • niftynet.network.highres3dnet_small module
    • niftynet.network.holistic_net module
    • niftynet.network.holistic_scalenet module
    • niftynet.network.scalenet module
    • niftynet.network.simple_gan module
    • niftynet.network.simulator_gan module
    • niftynet.network.toynet module
    • niftynet.network.unet module
    • niftynet.network.vae module
    • niftynet.network.vnet module
  • Module contents
• niftynet.utilities package
  • Submodules
    • niftynet.utilities.download module
    • niftynet.utilities.filename_matching module
    • niftynet.utilities.histogram_standardisation module
    • niftynet.utilities.restore_initializer module
    • niftynet.utilities.user_parameters_custom module
    • niftynet.utilities.user_parameters_default module
    • niftynet.utilities.user_parameters_helper module
    • niftynet.utilities.user_parameters_parser module
    • niftynet.utilities.user_parameters_regex module
    • niftynet.utilities.util_common module
    • niftynet.utilities.util_csv module
    • niftynet.utilities.versioning module
  • Module contents

Module contents

niftynet.main()